Hdfeos5 takes full advantage of the hdf5 library and file format. Remote sensors track carbon monoxide from aboard the nasa satellite down to its source. Hdf4, hierarchical data format, version 4 and earlier. Netcdf4 and hdf eos2 static libraries for intel fortran on. The new data structures are constructed from standard hdf data objects, using eos conventions, through the use of a software library. The following tar files have been placed on the edhs ftp site ftp to. The hdf eos software reference guide for the ecs project was prepared under the earth. This page contains some suggestions and links to get you started reading and using omi level 2 data. Hdf is the scientific data format standard selected by nasa as the baseline standard for eos. Idv can display the remote hdfeos files via opendap support info description. The following hdf eos routine listings provide a description of the tools.
These programs work for me and have yet to destroy my data, but that does not mean they will work for you. Module for reading data from hdf5 and hdfeos files with fortran. If mergecode is automerge, then the hdf eos library will attempt to merge swath fields into a single object. Powered by a free atlassian confluence open source project license granted to hdf. Highlevel library the highlevel hdf5 library includes several sets of convenience and standarduse apis to facilitate common hdf5 operations. The package includes a sample data file and a sample program showing how the module has to be used. Feb 19, 2014 introduction intel array visualizer is a software tool for data visualization includes array viewer. The software is based on hdf5, a new version of hdf provided by by the hdf group.
There are two hdf formats, hdf4, and hdf5 which each have their own libraries and drivers. Hdf is supported by many commercial and noncommercial software platforms, including java, matlab, scilab, octave, ocaml, mathematica, idl, python, r, fortran, and julia. This hdfeos metadata updater hmu program is for end users or data producers who have received hdfeos data with associated. Hdfeos is implemented as a c library extension of the standard hdf library with fortran bindings. This document is a users guide for hdfeos hierarchical data format earth observing system library tools. Programming and tool examples to access nasa hdf eos hdf files are also available. Presentation hdfeos tools and information center techylib. All omi level 2 data are stored in hdf eos 5 files.
Hdfeos library users guide for the ecs project, volume 1. Module to read selected datasets and attributes from hdf5hdfeos data files. Hdfeos ordinarily is based on the latest release of hdf. If youre a docker user, please try our docker image of hdfeos libraries through docker. Any sort of contact info for people that actually do this and might be able to help me would be much appreciated. In the ecs eos core system production system, the hdf eos library will be used inconjunction with sdp science data processing toolkit software. Summary of software using hdf5 by type december 2017.
This can be accomplished by configuring the hdf4 libraries as follows. Unsubscribe from hdf eos tools and information center. This document provides references to software packages that may be used for manipulating or displaying netcdf data. Java plugin for imagej and fij image processing package. Hdf eos2 based on hdf4 and hdf eos5 based on hdf5 are developed. It is an extension of ncsa hdf and uses the hdf library calls.
The hdfeos is the scientific data format standard selected by nasa. Status of hdfeos, related software and tools slideshare. Software is provided to simplify reading and writing hdfeos, and to guarantee consistency. Blog this veteran started a code bootcamp for people who went to bootcamp. Hdfeos, hierarchical data formatearth observing system. Delivery of hdf eos users guide and beta software june 1996 delivery of version 1 hdf eos, release a eosview available. Apr 05, 2017 this tutorial video explains how to use hdfview to examine the file content of hdf eos5 file.
It can handle very efficiently huge volumes of data in the current and in the emerging computational environments without any changes to the hdfeos5 applications. Compiling program using gfortran and the hdfeos2 library. Hdfeos is a standard format to store data collected from eos satellites. Hdfeos5 data model, file format and library earthdata. In addition to reading the native isis image cube format, cv has recently been enhanced to directly read the hdf and hdfeos file formats used for distributing data from various earth observing system eos missions. This vdd specifies the delivery contents of the hdf eos 2. High performance io library for particle based simulations. The hdf group is a notforprofit corporation with the mission of sustaining the hdf technologies and supporting hdf user communities worldwide with productionquality software and services. Services based on geolocation informationwill be built on hdf eos structures.
It also defines three additional data types based on hdf objects. Hdfeos2 based on hdf4 and hdfeos5 based on hdf5 are developed. Hdf5 high level apis, api for hdf5, open source, c, fortran, high level apis that come. The set of fields in the returned structure s depends on the individual file. Technology transfer is an important part of the mission at nasas goddard space flight center. There are also other libraries and programming interfaces that can be used to access nasa hdf and hdf eos data. As tim indicates, it appears an incompatible module file is being found. Under the gsfc software release policy, gfsc has several options for the release of gsfc developed software technologies.
Software for working with remotesensed data from earth observing system. Originally developed at the national center for supercomputing applications, it is supported by the hdf group, a nonprofit corporation whose mission is to ensure continued development of hdf5 technologies and the continued accessibility of data stored in hdf. Producers of products not covered by these structures, e. This should not be done if you wish to access the swath fields individually. The hdf group ensuring longterm access and usability of. The binary dumper utility dumps hdf eos objects in binary format. Both hdf4 and hdfeos are essentially defined by the api calls available through a software library. For hdfeos specific examples, see the examples of how to access and. It also hosts an archive of presentations made at an annual hdf eos hdf workshop. Oct 30, 20 presentation titled presentation hdf eos tools and information center is about software and sw development. Hierarchical data format hdf is a set of file formats hdf4, hdf5 designed to store and organize large amounts of data. Special examples such as retrieving geolocation information from an hdf eos grid file are also provided.
Hdf5 is a complete rewrite of the earlier hdf4 version, containing a different data model and user. The hdfeos tools and information center slideshare. How to open an hdfeos5 file and dataset with hdfview. These options now include open source software release.
Access hdf eos grid data in c and fortran hdf eos2 c, hdf eos5 c, hdf eos2 fortran, hdf eos5 fortran. The hdfeos software library allows a user to query or subset the contents of a data file by spatial or temporal coverage. To get information about an hdf5 file, use hdf5info. A few general examples to access hdf eos grid and swath objects are listed below. Im transitioning this page to github, and will advertise here when i have done so. Source code for the hdf libraries is available in fortran and c. In july 2005, ncsa announced that the hierarchical data format group is spinning off from the national center for supercomputing applications ncsa as a nonprofit corporation supporting open source software and nonproprietary data formats. This software reference guide is intended for use by anyone who wishes to use the hdfeos library to create or read eos data products. Tools that process standard hdf files also read hdf eos files. Asking for help, clarification, or responding to other answers. I have the problem of linking the hdfeos library to a fortran90 program. Thanks for contributing an answer to stack overflow.
Nasa eos remote sense data hdf format is the standard file format for storing data from nasas earth observing system eos mission. Lite functions to simplify creating and manipulating datasets, attributes and other features h5lt, h5ld images creating and manipulating hdf5 datasets intended to be interpreted as images. Hdf users guide information, support, and software. The hdfeos api allows users to easily migrate from hdf4based files to hdf5based files. Goddards technology, expertise, and facilities are a national asset that can be leveraged to develop new products and processes that benefit the united states. Petabytes of data stored in hdf and hdf5 to support the global climate change research program. The version described in this document is hdfeos version 5. Oct 24, 2019 gsfc conducts research and development in software and software technology as an essential response to the needs of gsfc missions. Commandline utilities that operate directly on hdf files. The workshops included educational sessions, handson training using hdf and hdf eos tools and utilities, a question and answer session led by an experts panel, and presentations by hdf eos users, software developers, and software vendors. Terry haran, software engineer at nsidc, works with data in both flat binary files and hdf eos format. It supports three data structures for remote sensing data. Idl, matlab, and ncl examples for hdf eos examples of how to access and visualize nasa hdf eos files using idl, matlab, and ncl. For more information about these file formats, read the hdf documentation at the hdf web site.
This site is dedicated to information about hdfeos and about tools available to view or work with hdfeos and other nasa hdf files. Hdfeos libraries are software libraries built on hdf libraries. Browse other questions tagged fortran fortran90 gfortran hdf or ask your own question. Tools that process standard hdf files also read hdfeos files. Hdfeos is implemented through a software extension to the hdf4. Unidata is currently providing a precompiled version of the netcdf4 library, but is the dynamic version, which does not work with. The center is dedicated to information about nasa hdf eos hdf and about tools available to view or work with nasa hdf eos hdf files. The hdf eos software library allows a user to query or subset the contents of a data file by spatial or temporal coverage. This migration would be much more difficult without the hdfeos api hiding most of the hdf4 to hdf5 api changes. This document is a users guide for hdf eos hierarchical data format earth observing system library tools.
C and fortran libraries are available, and applications such as matlab and idl have been adapted to understand hdfeos files. The current version contains software for creating. Hdfeos employs standard hdf objects, including images, tables, text, and data arrays. First of all, we assume that you have installed the hdfeos2 fortran library correctly. Highlevel language for hdf5 similar to sql freeware. Hdfeos is an extension of hdf4 from the hdf group thg. We include information about both freelyavailable and licensed commercial software that can be used with netcdf data. These data types allow the file contents to be referenced to earth coordinates, such as latitude and longitude, and to time. Status of hdfeos and access tools will be summarized. The eos metadata embedded in an hdfeos data granule from ecs reflects the information available at the time of granule creation, while the metadata in the. The version described in this document is hdf eos version 5. Overview and examples was prepared under the eosdis evolution and development eed contract nng10hp02c. In your program include the appropriate hdf5 header files and call the.
Scientific visualization and analysis tools that read and write hdf files. The software is based on hdf5, a new version of hdf provided by ncsa. The version described in this document is hdf eos version 3. Hdfeos libraries support the construction of data structures. Hierarchical data format hdf4 is a generalpurpose, machineindependent standard for storing scientific data in files, developed by the national center for supercomputing applications ncsa. Makes possible the management of extremely large and complex data collections. It supports an unlimited variety of datatypes, and is designed for flexible and efficient io and for high volume and complex data. There are also other libraries and programming interfaces that can be used to access nasa hdf and hdfeos data. This module is written to read user selected datasets and attributes from hdf5 and hdf eos datafiles for further processing without having to go into the details of reading such files. This function corresponds to the swinqgeofields function in the hdfeos library c api, but because matlab uses fortran style ordering, the fields parameter is reversed with respect to the c library api. This site is dedicated to information about hdf eos and about tools available to view or work with hdf eos and other nasa hdf files. Aug 02, 2012 intel fortran compilers for linux or mac os x application notes hdf5 is a data format and an associated software library designed to store, access, manage, exchange, and archive diverse, complex data in continuously evolving heterogeneous computing and storage environments. The hdfeos2 is a software library designed built on hdf4 to support eosspecific data structures, namely grid, point, and swath.
This tutorial video explains how to use hdfview to examine the file content of hdf eos5 file. This users guide accompanies version 2 software, which is available to the user community on the edhs1 server. How to open an hdfeos5 file and dataset with hdfview youtube. If your os distribution already contains prebuilt hdf library you can use one from the distribution. The library tools are written in the c language and a fortran interface is provided. Matlab provides a family of functions that parallel the c and fortran application programmer interfaces apis provided by the ncsa hdf and nasa hdfeos libraries. Miscellaneous examples these very old examples resulted from working with users, and are not fully tested. Programmingc, fortran, idl and matlab and tool examples to access hdfeos and other nasa hdf files are.
Much of my current coding is in python, and isnt here. Format description for hdfeos hdfeos hierarchical data format v4 earth observing system is a selfdescribing file format for transfer of various types of data between different machines. Visualization of hdfhdfeos format earth observing system. Open source software for working with remotesensed data from earth observing system. Hdfeos is the official data format for eosdis data production and archive. Hdf5 is a complete rewrite of the earlier hdf4 version, containing a different data model and user interface. This is an extension of standard hdf 5, mainly standardising how metadata is stored in the files, and the location of certain groups within a file.
Hdf is highperformance io with a rich set of integrated performance features that allow. Use of hdfeos also can eliminate duplication of software development efforts, especially for analysis and visualization software. Use of hdfeos insures that data can be accessed by eosdis scientists and nonscientists from multiple disciplines. Reusable ui components pluggable ui pluggable file format support array. The hdfeos software reference guide for the ecs project was prepared under the earth observing system data and information system eosdis core system ecs, contract nas560000. If you are going to write a fortran program and compile it with the hdfeos2 library, you need to build the hdfeos2 library with dfc2fortran. This function corresponds to the gdwritefield function in the hdfeos library c api, but because matlab uses fortran style ordering, the start and stride parameters are reversed with respect to the c library api. Introduction to hdfeos national snow and ice data center. The eos project is a good example of a community or application domain standardizing on a data format.
Hdf eos libraries are software libraries built on hdf libraries. The integrated data viewer idv from unidata is a javatmbased software framework. Good afternoon, i have the intel visual fortran composer xe 2011 and visual studio 2010 and i am trying to find the folwing libraries for this compiler, on computers running under windows 7 system. This is an extension of standard hdf5, mainly standardising how metadata is stored in the files, and the location of certain groups within a file. This is useful for feeding the output of it into existing program, which does not understand hdf, for example. Description fields,rank,datatype inqgeofieldsswathid returns the list of geolocation fields fields, the rank of each field, and the data type of each field.
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